Genetic Epidemiology Workshop [August 2010]

Website: OpenMx
Text: Methodology for Genetic Studies of Twins and Families by Neale & Cardon, 1992 revision PDF of Neale & Maes book.
Manual: Mx: Statistical Modeling by Neale, Boker, Xie & Maes, 2006 PDF of Mx Manual.

Number Lecture Topic Presentation/Media Notes and Examples
01 Introduction to R Dr. York’s R Files Dr. York’s Session 11
R for OpenMx Reference Key
02 Introduction to OpenMx OpenMx SMEP Presentation
OpenMx Intro Presentation
Intro Scripts
OpenMx Reference Key
First OpenMx script
03 Matrix Algebra & Optimization Matrix Algebra
Matrix Algebra Exercises
04 Means & Variance Modeling   Univariate Saturated
Bivariate Saturated
05 Saturated Twin Modeling   Univariate Twin Saturated -Matrix Raw Continuous
Univariate Twin Saturated -Matrix Raw Binary
Univariate Twin Saturated -Matrix Raw Ordinal
06 Univariate Twin Modeling   Univariate Twin ACE -Matrix Raw Continuous
Univariate Twin ACE -Matrix Raw Binary
Univariate Twin ACE -Matrix Raw Ordinal
07 Heterogeneity Twin Modeling ACE 5 group graph
ADE 5 group graph
Heterogeneity Twin Quant Diff [same sex] -Matrix Raw Continuous
Heterogeneity Twin Quant Diff [same sex] -Matrix Raw Ordinal
Heterogeneity Twin Quant/Qual Diff [SS+OS] -Matrix Raw Continuous
Heterogeneity Twin Quant/Qual Diff [SS+OS] -Matrix Raw Ordinal
08 Moderated Twin Modeling    
09 Bivariate Twin Modeling    
10 Multivariate Twin Modeling IP graph
CP graph
Multivariate Twin ACE -Matrix Raw Continuous
11 Helper Functions Genetic Epidemiology Helper Functions Gen Epi Helper Functions