Multivariate Genetic Modeling
| Time | Speaker | Topic | Presentation | Notes/Examples |
|---|---|---|---|---|
| 09:00 – 10:00 | Kenneth S. Kendler | Statistical Genetics of Substance Use (SU)/td> | Introduction | |
| 10:00 – 10:30 | Timothy P. York / Elizabeth Prom-Wormley | Review 1: R & OpenMx | R_intro ACE_BMI.Rdata ACE_BMI.Rmd |
|
| 11:00 – 12:30 | Hermine H. Maes / Timothy C. Bates | Review 2: Genetic Factor Analysis Multivariate Sex Limitation | MultivariateGeneticAnalysis | twinMulSatAceCon.R twinHetMulAceCon.R usski.rec |
| 01:30 – 03:00 | Timothy Brick / Joshua N. Pritikin | Fundamentals of Optimization & Model Fitting | Optimization-OpenMxTwinWorkshop2015 opt.pdf |
tour.R |
| 03:30 – 05:00 | Nathan A. Gillespie | Direction of Causation & Comorbidity Models Mutualism, Sibling / Spousal Interaction | DirectionOfCausation | NU321_cannabis_psychosis.sav Gillespie_DOC_modelling.R polychoricMatrix3.R |
Measurement & Phenotyping
| Time | Speaker | Topic | Presentation | Notes/Examples |
|---|---|---|---|---|
| 09:00 – 10:30 | Cristopher R. Estabrook / Joshua Pritikin | Sum & Factor Scores / Item Response Models | FactorScoringAndIRT2015.pdf pritikin-schmidt-20151022.pdf |
factorScores2015Oct27.R agesNICdata.txt nsduh_small.csv |
| 11:00 – 12:30 | Michael C. Neale | Measurement Invariance | MeasurementInvariance | getFactorScoresNew3.R mi_modtest1.R mitest_can.R nsduh090913.txt |
| 01:30 – 03:00 | Michael D. Hunter | Behavior Genetic Models in Multilevel Clothing | MultilevelBG | buildingBlocks.R |
| 03:30 – 05:00 | Timothy Brick | Latent Class Analysis & Factor Mixture Model | HeterogeneitySearch | LCA-Basic.R Data_Oz_CAN_Sim.dat SEMtree-Basic.R waisr-transformed.txt |
Genes, Environment & Development
| Time | Speaker | Topic | Presentation | Notes/Examples |
|---|---|---|---|---|
| 09:00 – 10:30 | Nathan A. Gillespie | Latent Growth Curve Modeling | Gillespie_Hunter_Wedneday.pdf Gillespie_Eaves2015.pdf |
DualChangeScore.R simData.RData |
| 11:00 – 12:30 | Michael C. Neale | Hierarchical Mixed Modeling | RegimeSwitching.pdf regimeSwitching2015SEM.pdf |
GrowthMixtureModel_PathRaw.R GrowthMixtureModel_MatrixRaw.R RegimeSwitching_MatrixRaw NoCholDifferentTransitions.R RegimeSwitching_MatrixRaw NoCholDifferentTransitionsAllFixed.R nlsy.txt |
| 01:30 – 03:30 | Michael D. Hunter | Hidden Markov & Latent Transition Models | LatentTransitionHMM | funcHMM.R HmmLta.R |
| 03:30 – 05:00 | Steven M. Boker | Dynamical Systems Models: Adaptive Equilibrium Regulation | AGES-Boker-AER-151028.pdf | AnalysisTest1-151017-d.R Fourwells.mov GLLA-Sim-AR1-151028.R GLLA-Sim-DLO-151028.R GLLA-Test1-151028.R GLLAfunctions.R LDE-Sim-AR1-151028.R LDE-Sim-AR1-FitDLO-151028.R |
Family Processes
| Time | Speaker | Topic | Presentation | Notes/Examples |
|---|---|---|---|---|
| 08:00 – 09:00 | Timothy P. York | Functions in R | AGES2015Functions.R | |
| 09:00 – 10:30 | Tim Bigdeli / Benjamin M. Neale | Introduction to Modeling Genomewide Data | Biometrical Model | |
| 11:00 – 12:30 | Lindon J. Eaves | Genetic Relationship Matrices Theory | GCTA Maternal Effects | |
| 11:00 – 12:30 | Brad Verhulst / Sarah Medland | Sibling Models and Age Difference Moderation | Kirkpatrick_AGES2015–mxGREML.pptx | TaSsim1.R CondenseSlotsDemo.R AGES2015GRM.grm.id AGES2015GRM.grm.bin MAGES2015GRM.grm.N.bin GREMLphenodata.csv AGES2015FactorModGRM.grm.id AGES2015FactorModGRM.grm.bin AGES2015FactorModGRM.grm.N.bin GREMLFactorModData.csv |
| 03:30 – 05:00 | Benjamin M. Neale | SNP-based Heritability Estimating – Alternative Methods | AGES_LDSC.pptx |
GxE Interaction
| Time | Speaker | Topic | Presentation | Notes/Examples |
|---|---|---|---|---|
| 09:00 – 10:30 | Bradley Verhulst | Genotype Environment Interaction | NIDA GxE | |
| 11:00 – 12:30 | Timothy C. Bates | Moderation of ACE in Twin Designs | ||
| 01:30 – 03:00 | Roseann Peterson / Benjamin M. Neale | Mediation / Mendelian Randomization | ||
| 03:30 – 05:00 | Lindon J. Eaves | Future Directions |
