AGES Workshop – Oct. 23-27, 2017

Statistical Genetics & Genomics

Time Speaker Topic Presentation Notes/Examples
09:00 – 09:30 Michael Neale Statistical Genetics of Substance Use (SU) AGES Intro
09:30 – 10:30 Sarah Medland Genetic Analysis of Complex Traits Intro Genetic Analysis Of Complex Traits
11:00 – 12:30 Robert Kirkpatrick Analyses of Genetic Relationship Matrices in OpenMx mxGREML pptx mxGREML R scripts
01:30 – 03:00 Ben Neale SNP-based Heritability Estimating – Alternative Methods LD Score Regression pptx
03:30 – 05:00 Sarah Medland Polygenic Risk Scores Polygenic Risk Scores PRS example

Multivariate Genetic Modeling

Time Speaker Topic Presentation Notes/Examples
08:00 – 09:00 Ben Neale SNP-based Genetic Correlation Genetic Correlation pptx
09:00 – 10:30 Hermine Mae Review Multivariate Genetic Analysis in OpenMx Multivariate Genetic Analysis pdf twoACE.zip
twoACEok.zip
11:00 – 12:30 Bradley Verhulst Genotype x Environment Correlation & Interaction GEinterplay pptx GEinterplay.zip
GxEdat.txt
GxEpractical.R
01:30 – 03:00 Michael Neale Measurement & Non-normal Distributions Measurement Invariance Measurement.zip
03:30 – 05:00 Michael Hunter Multi-level Behavior Genetic Models Multilevel Behavior Genetic Models MultilevelBG.zip

Statistical & Optimization Issues

Time Speaker Topic Presentation Notes/Examples
08:00 – 09:00 Timothy Brick Review Optimization Optimization pdf
09:00 – 10:30 Joshua Pritikin / Timothy Brick Joint Ordinal & Continuous Data Analysis WLS Joint Ordinal Continuous pdf
Weighted Least Squares pdf
JointOrdCont.zip
WLS.zip
11:00 – 12:30 Joshua Pritikin Power, Boundary & Confidence Interval Issues ConfidenceIntervals pdf
PowerAGES pptx
ConfIntervals.zip
Power.zip
01:30 – 03:00 Robert Kirkpatrick Bootstrap, Jackknife & Permutation Bootstrap pptx Bootstrap.zip
03:30 – 05:00 Michael Hunter iFACE & Intra-Person Dynamics iFACE pdf iFACE.zip

Genes, Environment & Development

Time Speaker Topic Presentation Notes/Examples
08:00 – 09:00 Bradley Verhulst Review Autoregressive & Latent Growth Models Longitudinal Modeling pptx
09:00 – 10:30 Nathan Gillespie Multivariate Latent Growth Curve & Dual Change Score Multivariate Latent Growth
GillespieEaves2015
Eaves1986
Autoregression & Differential Equations
Dual_change_score_model.R
TimeSeries1.R
11:00 – 12:30 Michael Neale Growth Mixture Modeling, Regime Switchin Growth Curves & Regime Switching pdf RegimeSwitching.R
RegimeSwitching.R
data.zip
01:30 – 03:00 Timothy Brick & Lance Rappaport Ecological Momentary Assessment Modeling Ecological Momentary Assessment pdf
MSEM pdf
Multilevel.zip
riSD.zip
03:30 – 05:00 Steven Boker Dynamical Systems Models Dynamical Systems pdf
Boker2015a
Boker2016a
TheoryDataAndMethods pdf
EmbedTimeMisspecify pdf
AER_KL pdf
ChangesInDynamics.zip
GLLA.zip
M3WorkshipSlides.zip
M3WorkshopArticles.zip
M3WorkshopScripts.zip
AER.zip

Causal Modeling

Time Speaker Topic Presentation Notes/Examples
08:30 – 09:00 Michael Neale / Camelia Minica Review Direction of Causation
09:00 – 10:30 Camelia Minica / Michael Neale Mendelian Randomization & Direction of Causation Mendelian Randomization pdf MR.zip
MR-DoC.zip
11:00 – 12:30 Bradley Verhulst GW-SEM Modeling -Twin Association Methods GW-SEM_AGES pptx
GW-SEM pdf
GW-SEM.zip
GW-SEM_processed.zip
01:30 – 03:00 All Faculty Bring your Own Data
03:30 – 05:00 Timothy York / Aaron Wolen Reporting OpenMx with R Markdown and the Open Science Framework Reporting OpenMx with RMd pdf RMarkdown.zip